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Welcome to SpolLineages

SpolLineages software tool allows users to predict Mycobacterium tuberculosis complex (MTBC) lineages from Spoligotyping and/or MIRU-VNTR patterns.
This software tool was developed as part of a research collaboration between Institut Pasteur de la Guadeloupe and Université des Antilles.
Go to this page to run your analysis!
If you want to download the command line version of the tool click here!
For more information, please see the Help or the News page.

For full description, see the following publication:
Couvin D, Segretier W, Stattner E, Rastogi N. 2020. Novel methods included in SpolLineages tool for fast and precise prediction of Mycobacterium tuberculosis complex spoligotype families. Database (Oxford). 2020 Dec 15;2020:baaa108. PMID: 33320180

Copyright © 2020, Institut Pasteur de la Guadeloupe. All rights reserved. Please contact authors for further details.